Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Apoa4P06728 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Apoa4P06728 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Apoa4P06728 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Apoa4P06728 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Apoa4P06728 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Apoa4P06728 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Apoa4P06728 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Apoa4P06728 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Apoa4P06728 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Apoa4P06728 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Apoa4P06728 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Apoa4P06728 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Apoa4P06728 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.17□□□□□ -0.14
Apoa4P06728 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.17□□□□□ -0.14
Apoa4P06728 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.17□□□□□ -0.14
Apoa4P06728 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.17□□□□□ -0.14
Apoa4P06728 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Apoa4P06728 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.17□□□□□ -0.14
Apoa4P06728 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoa4P06728 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Apoa4P06728 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.16□□□□□ -0.14
Apoa4P06728 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Apoa4P06728 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Apoa4P06728 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.16□□□□□ -0.14
Apoa4P06728 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Apoa4P06728 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Apoa4P06728 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Psmb5-202ENSMUST00000227257 622 ntBASIC14.16□□□□□ -0.14
Apoa4P06728 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
Apoa4P06728 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Apoa4P06728 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.16□□□□□ -0.14
Apoa4P06728 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.16□□□□□ -0.14
Apoa4P06728 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoa4P06728 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Apoa4P06728 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoa4P06728 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoa4P06728 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.15□□□□□ -0.14
Apoa4P06728 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoa4P06728 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoa4P06728 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.15□□□□□ -0.14
Apoa4P06728 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Apoa4P06728 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoa4P06728 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Apoa4P06728 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoa4P06728 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoa4P06728 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoa4P06728 Gm7461-201ENSMUST00000058918 827 ntBASIC14.15□□□□□ -0.14
Apoa4P06728 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.15□□□□□ -0.14
Apoa4P06728 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoa4P06728 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Apoa4P06728 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoa4P06728 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms