Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.32□□□□□ -0.44
P04946 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.32□□□□□ -0.44
P04946 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.32□□□□□ -0.44
P04946 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
P04946 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.32□□□□□ -0.44
P04946 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.32□□□□□ -0.44
P04946 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.32□□□□□ -0.44
P04946 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.32□□□□□ -0.44
P04946 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P04946 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.32□□□□□ -0.44
P04946 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
P04946 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04946 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
P04946 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
P04946 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
P04946 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
P04946 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.31□□□□□ -0.44
P04946 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.31□□□□□ -0.44
P04946 Gm23547-201ENSMUST00000158210 271 ntBASIC12.31□□□□□ -0.44
P04946 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
P04946 Gm9522-201ENSMUST00000182394 926 ntBASIC12.31□□□□□ -0.44
P04946 Gm37444-201ENSMUST00000193605 439 ntBASIC12.31□□□□□ -0.44
P04946 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
P04946 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
P04946 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.31□□□□□ -0.44
P04946 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.31□□□□□ -0.44
P04946 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.31□□□□□ -0.44
P04946 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
P04946 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04946 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
P04946 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
P04946 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
P04946 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
P04946 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
P04946 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
P04946 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
P04946 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
P04946 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.3□□□□□ -0.44
P04946 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
P04946 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
P04946 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.3□□□□□ -0.44
P04946 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.3□□□□□ -0.44
P04946 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04946 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P04946 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms