Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.42■□□□□ 0.06
Chrna1P04756 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna1P04756 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Chrna1P04756 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna1P04756 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna1P04756 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna1P04756 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna1P04756 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Chrna1P04756 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna1P04756 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.42■□□□□ 0.06
Chrna1P04756 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Chrna1P04756 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna1P04756 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna1P04756 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chrna1P04756 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Chrna1P04756 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Chrna1P04756 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Chrna1P04756 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Chrna1P04756 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Chrna1P04756 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Chrna1P04756 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.41■□□□□ 0.06
Chrna1P04756 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.41■□□□□ 0.06
Chrna1P04756 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.41■□□□□ 0.06
Chrna1P04756 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.41■□□□□ 0.06
Chrna1P04756 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.41■□□□□ 0.06
Chrna1P04756 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.41■□□□□ 0.06
Chrna1P04756 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Chrna1P04756 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Chrna1P04756 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Chrna1P04756 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Chrna1P04756 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Chrna1P04756 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Chrna1P04756 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chrna1P04756 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.41■□□□□ 0.06
Chrna1P04756 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.4■□□□□ 0.06
Chrna1P04756 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Chrna1P04756 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Chrna1P04756 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Chrna1P04756 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Chrna1P04756 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.4■□□□□ 0.06
Chrna1P04756 Gm28760-201ENSMUST00000185995 736 ntBASIC15.4■□□□□ 0.06
Chrna1P04756 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.4■□□□□ 0.06
Chrna1P04756 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.4■□□□□ 0.06
Chrna1P04756 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.4■□□□□ 0.06
Chrna1P04756 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Chrna1P04756 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Chrna1P04756 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.4■□□□□ 0.06
Chrna1P04756 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chrna1P04756 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna1P04756 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna1P04756 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna1P04756 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna1P04756 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna1P04756 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna1P04756 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna1P04756 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Chrna1P04756 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chrna1P04756 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms