Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04224 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
P04224 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04224 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04224 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04224 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04224 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
P04224 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.65□□□□□ -0.38
P04224 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.65□□□□□ -0.38
P04224 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
P04224 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
P04224 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.65□□□□□ -0.38
P04224 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
P04224 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.65□□□□□ -0.38
P04224 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.65□□□□□ -0.38
P04224 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
P04224 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.65□□□□□ -0.38
P04224 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.65□□□□□ -0.38
P04224 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
P04224 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
P04224 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
P04224 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
P04224 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
P04224 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
P04224 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.64□□□□□ -0.39
P04224 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
P04224 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
P04224 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
P04224 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
P04224 Mir7071-201ENSMUST00000184847 69 ntBASIC12.64□□□□□ -0.39
P04224 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Gm8655-201ENSMUST00000221159 852 ntBASIC12.64□□□□□ -0.39
P04224 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.64□□□□□ -0.39
P04224 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
P04224 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.64□□□□□ -0.39
P04224 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.64□□□□□ -0.39
P04224 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.64□□□□□ -0.39
P04224 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
P04224 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
P04224 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.63□□□□□ -0.39
P04224 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
P04224 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
P04224 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms