Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
TcraP01849 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
TcraP01849 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
TcraP01849 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.53□□□□□ -0.72
TcraP01849 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
TcraP01849 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
TcraP01849 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.53□□□□□ -0.72
TcraP01849 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
TcraP01849 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
TcraP01849 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
TcraP01849 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.52□□□□□ -0.72
TcraP01849 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
TcraP01849 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
TcraP01849 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
TcraP01849 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
TcraP01849 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
TcraP01849 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
TcraP01849 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
TcraP01849 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
TcraP01849 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
TcraP01849 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.52□□□□□ -0.73
TcraP01849 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
TcraP01849 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.52□□□□□ -0.73
TcraP01849 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Gm1818-201ENSMUST00000169406 1184 ntBASIC10.52□□□□□ -0.73
TcraP01849 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
TcraP01849 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.52□□□□□ -0.73
TcraP01849 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.52□□□□□ -0.73
TcraP01849 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
TcraP01849 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
TcraP01849 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.52□□□□□ -0.73
TcraP01849 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
TcraP01849 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
TcraP01849 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.52□□□□□ -0.73
TcraP01849 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TcraP01849 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
TcraP01849 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC10.51□□□□□ -0.73
TcraP01849 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
TcraP01849 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Gm25406-201ENSMUST00000157599 105 ntBASIC10.51□□□□□ -0.73
TcraP01849 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
TcraP01849 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.51□□□□□ -0.73
TcraP01849 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.51□□□□□ -0.73
TcraP01849 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
TcraP01849 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
TcraP01849 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
TcraP01849 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
TcraP01849 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms