Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Setdb1O88974 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.52■□□□□ 0.39
Setdb1O88974 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Setdb1O88974 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Setdb1O88974 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Setdb1O88974 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Setdb1O88974 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Setdb1O88974 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Setdb1O88974 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Setdb1O88974 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.51■□□□□ 0.39
Setdb1O88974 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.51■□□□□ 0.39
Setdb1O88974 Gm19220-201ENSMUST00000222682 803 ntBASIC17.51■□□□□ 0.39
Setdb1O88974 Gm9229-201ENSMUST00000222777 126 ntBASIC17.51■□□□□ 0.39
Setdb1O88974 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.51■□□□□ 0.39
Setdb1O88974 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.51■□□□□ 0.39
Setdb1O88974 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.51■□□□□ 0.39
Setdb1O88974 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Setdb1O88974 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Setdb1O88974 Gm13226-201ENSMUST00000117838 404 ntBASIC17.5■□□□□ 0.39
Setdb1O88974 Mir3102-201ENSMUST00000175555 104 ntBASIC17.5■□□□□ 0.39
Setdb1O88974 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.5■□□□□ 0.39
Setdb1O88974 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Setdb1O88974 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Setdb1O88974 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Setdb1O88974 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.5■□□□□ 0.39
Setdb1O88974 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Setdb1O88974 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Setdb1O88974 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.5■□□□□ 0.39
Setdb1O88974 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Setdb1O88974 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Setdb1O88974 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Setdb1O88974 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Setdb1O88974 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.5■□□□□ 0.39
Setdb1O88974 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Setdb1O88974 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Setdb1O88974 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Setdb1O88974 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Setdb1O88974 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.49■□□□□ 0.39
Setdb1O88974 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Gm18827-201ENSMUST00000188341 790 ntBASIC17.49■□□□□ 0.39
Setdb1O88974 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Setdb1O88974 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Setdb1O88974 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.49■□□□□ 0.39
Setdb1O88974 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Setdb1O88974 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Setdb1O88974 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 Gm8062-201ENSMUST00000139696 444 ntBASIC17.48■□□□□ 0.39
Setdb1O88974 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Setdb1O88974 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.48■□□□□ 0.39
Setdb1O88974 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 Gm45453-201ENSMUST00000211758 853 ntBASIC17.48■□□□□ 0.39
Setdb1O88974 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.48■□□□□ 0.39
Setdb1O88974 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.48■□□□□ 0.39
Setdb1O88974 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Setdb1O88974 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Setdb1O88974 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Setdb1O88974 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Setdb1O88974 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms