Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ttc3O88196 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ttc3O88196 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ttc3O88196 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ttc3O88196 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ttc3O88196 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.98□□□□□ -0.01
Ttc3O88196 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.98□□□□□ -0.01
Ttc3O88196 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.98□□□□□ -0.01
Ttc3O88196 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ttc3O88196 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.97□□□□□ -0.01
Ttc3O88196 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ttc3O88196 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.97□□□□□ -0.01
Ttc3O88196 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ttc3O88196 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Gm11478-201ENSMUST00000117851 599 ntBASIC14.97□□□□□ -0.01
Ttc3O88196 Gm14127-201ENSMUST00000117906 678 ntBASIC14.97□□□□□ -0.01
Ttc3O88196 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.97□□□□□ -0.01
Ttc3O88196 Gm11524-201ENSMUST00000119349 807 ntBASIC14.97□□□□□ -0.01
Ttc3O88196 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Ttc3O88196 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ttc3O88196 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.97□□□□□ -0.01
Ttc3O88196 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.97□□□□□ -0.01
Ttc3O88196 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Ttc3O88196 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ttc3O88196 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Ttc3O88196 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ttc3O88196 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ttc3O88196 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ttc3O88196 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ttc3O88196 Gm37917-201ENSMUST00000194711 392 ntBASIC14.96□□□□□ -0.01
Ttc3O88196 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.96□□□□□ -0.01
Ttc3O88196 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.96□□□□□ -0.01
Ttc3O88196 Gm19220-201ENSMUST00000222682 803 ntBASIC14.96□□□□□ -0.01
Ttc3O88196 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.96□□□□□ -0.01
Ttc3O88196 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ttc3O88196 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ttc3O88196 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ttc3O88196 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ttc3O88196 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ttc3O88196 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ttc3O88196 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ttc3O88196 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ttc3O88196 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ttc3O88196 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ttc3O88196 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Ttc3O88196 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ttc3O88196 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ttc3O88196 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ttc3O88196 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ttc3O88196 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.96□□□□□ -0.01
Ttc3O88196 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ttc3O88196 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ttc3O88196 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.96□□□□□ -0.02
Ttc3O88196 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ttc3O88196 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.96□□□□□ -0.02
Ttc3O88196 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ttc3O88196 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ttc3O88196 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Ttc3O88196 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ttc3O88196 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.96□□□□□ -0.02
Ttc3O88196 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Ttc3O88196 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.95□□□□□ -0.02
Ttc3O88196 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.95□□□□□ -0.02
Ttc3O88196 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ttc3O88196 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.95□□□□□ -0.02
Ttc3O88196 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ttc3O88196 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.95□□□□□ -0.02
Ttc3O88196 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Ttc3O88196 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ttc3O88196 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ttc3O88196 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ttc3O88196 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms