Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.35□□□□□ -0.59
Pde6dO55057 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.35□□□□□ -0.59
Pde6dO55057 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.35□□□□□ -0.59
Pde6dO55057 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Pde6dO55057 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pde6dO55057 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pde6dO55057 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Pde6dO55057 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pde6dO55057 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.34□□□□□ -0.59
Pde6dO55057 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.34□□□□□ -0.59
Pde6dO55057 Gm12497-201ENSMUST00000138778 237 ntBASIC11.34□□□□□ -0.59
Pde6dO55057 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.34□□□□□ -0.59
Pde6dO55057 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.34□□□□□ -0.59
Pde6dO55057 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Gm44454-201ENSMUST00000198541 138 ntBASIC11.34□□□□□ -0.59
Pde6dO55057 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Pde6dO55057 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pde6dO55057 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.34□□□□□ -0.59
Pde6dO55057 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Pde6dO55057 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pde6dO55057 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pde6dO55057 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pde6dO55057 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pde6dO55057 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.33□□□□□ -0.6
Pde6dO55057 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pde6dO55057 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pde6dO55057 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Gm8520-201ENSMUST00000186517 868 ntBASIC11.33□□□□□ -0.6
Pde6dO55057 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.33□□□□□ -0.6
Pde6dO55057 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.33□□□□□ -0.6
Pde6dO55057 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.33□□□□□ -0.6
Pde6dO55057 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms