Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Rnf13O54965 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf13O54965 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rnf13O54965 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Rnf13O54965 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rnf13O54965 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.07□□□□□ -0.32
Rnf13O54965 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf13O54965 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.06□□□□□ -0.32
Rnf13O54965 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.06□□□□□ -0.32
Rnf13O54965 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf13O54965 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf13O54965 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf13O54965 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rnf13O54965 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rnf13O54965 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.06□□□□□ -0.32
Rnf13O54965 Gm24589-201ENSMUST00000116692 94 ntBASIC13.06□□□□□ -0.32
Rnf13O54965 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.06□□□□□ -0.32
Rnf13O54965 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Rnf13O54965 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rnf13O54965 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
Rnf13O54965 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Rnf13O54965 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf13O54965 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.05□□□□□ -0.32
Rnf13O54965 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.05□□□□□ -0.32
Rnf13O54965 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.05□□□□□ -0.32
Rnf13O54965 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Acot6-202ENSMUST00000222921 3622 ntBASIC13.05□□□□□ -0.32
Rnf13O54965 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Rnf13O54965 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rnf13O54965 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rnf13O54965 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Rnf13O54965 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.05□□□□□ -0.32
Rnf13O54965 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.05□□□□□ -0.32
Rnf13O54965 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Gm4899-201ENSMUST00000178708 719 ntBASIC13.05□□□□□ -0.32
Rnf13O54965 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.05□□□□□ -0.32
Rnf13O54965 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.05□□□□□ -0.32
Rnf13O54965 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf13O54965 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf13O54965 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms