Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6bO35451 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6bO35451 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Atf6bO35451 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6bO35451 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6bO35451 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atf6bO35451 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.52□□□□□ -0.4
Atf6bO35451 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6bO35451 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6bO35451 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6bO35451 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6bO35451 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6bO35451 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6bO35451 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.52□□□□□ -0.4
Atf6bO35451 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Atf6bO35451 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6bO35451 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6bO35451 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.52□□□□□ -0.4
Atf6bO35451 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atf6bO35451 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Gm6973-201ENSMUST00000117080 721 ntBASIC12.52□□□□□ -0.41
Atf6bO35451 Gm13365-201ENSMUST00000121188 973 ntBASIC12.52□□□□□ -0.41
Atf6bO35451 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.52□□□□□ -0.41
Atf6bO35451 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.52□□□□□ -0.41
Atf6bO35451 Gm26308-201ENSMUST00000157768 69 ntBASIC12.52□□□□□ -0.41
Atf6bO35451 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
Atf6bO35451 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.52□□□□□ -0.41
Atf6bO35451 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Atf6bO35451 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Atf6bO35451 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Atf6bO35451 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.52□□□□□ -0.41
Atf6bO35451 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.41
Atf6bO35451 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Atf6bO35451 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Atf6bO35451 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.52□□□□□ -0.41
Atf6bO35451 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.52□□□□□ -0.41
Atf6bO35451 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atf6bO35451 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Atf6bO35451 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.51□□□□□ -0.41
Atf6bO35451 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Atf6bO35451 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Atf6bO35451 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Atf6bO35451 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.51□□□□□ -0.41
Atf6bO35451 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.51□□□□□ -0.41
Atf6bO35451 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.51□□□□□ -0.41
Atf6bO35451 Gm18057-201ENSMUST00000208220 503 ntBASIC12.51□□□□□ -0.41
Atf6bO35451 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.51□□□□□ -0.41
Atf6bO35451 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.51□□□□□ -0.41
Atf6bO35451 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Atf6bO35451 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms