Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Efnb3O35393 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Efnb3O35393 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.38□□□□□ -0.59
Efnb3O35393 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Efnb3O35393 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Efnb3O35393 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.38□□□□□ -0.59
Efnb3O35393 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.38□□□□□ -0.59
Efnb3O35393 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Efnb3O35393 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Gm8749-201ENSMUST00000117737 331 ntBASIC11.38□□□□□ -0.59
Efnb3O35393 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.38□□□□□ -0.59
Efnb3O35393 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.38□□□□□ -0.59
Efnb3O35393 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.38□□□□□ -0.59
Efnb3O35393 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.38□□□□□ -0.59
Efnb3O35393 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.38□□□□□ -0.59
Efnb3O35393 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Efnb3O35393 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Efnb3O35393 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.38□□□□□ -0.59
Efnb3O35393 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Efnb3O35393 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Efnb3O35393 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
Efnb3O35393 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.37□□□□□ -0.59
Efnb3O35393 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.37□□□□□ -0.59
Efnb3O35393 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Gm37153-201ENSMUST00000193637 231 ntBASIC11.37□□□□□ -0.59
Efnb3O35393 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.37□□□□□ -0.59
Efnb3O35393 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.37□□□□□ -0.59
Efnb3O35393 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Efnb3O35393 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Efnb3O35393 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Efnb3O35393 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Efnb3O35393 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Efnb3O35393 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Efnb3O35393 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.36□□□□□ -0.59
Efnb3O35393 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.36□□□□□ -0.59
Efnb3O35393 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms