Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cpsf2O35218 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.42■□□□□ 0.06
Cpsf2O35218 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.42■□□□□ 0.06
Cpsf2O35218 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf2O35218 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf2O35218 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf2O35218 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf2O35218 Gm16198-201ENSMUST00000118766 670 ntBASIC15.42■□□□□ 0.06
Cpsf2O35218 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.42■□□□□ 0.06
Cpsf2O35218 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.42■□□□□ 0.06
Cpsf2O35218 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.42■□□□□ 0.06
Cpsf2O35218 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf2O35218 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.42■□□□□ 0.06
Cpsf2O35218 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf2O35218 Gm2451-201ENSMUST00000199447 999 ntBASIC15.42■□□□□ 0.06
Cpsf2O35218 Gm10290-201ENSMUST00000200451 999 ntBASIC15.42■□□□□ 0.06
Cpsf2O35218 Gm2651-201ENSMUST00000203560 838 ntBASIC15.42■□□□□ 0.06
Cpsf2O35218 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.42■□□□□ 0.06
Cpsf2O35218 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.42■□□□□ 0.06
Cpsf2O35218 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.42■□□□□ 0.06
Cpsf2O35218 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.42■□□□□ 0.06
Cpsf2O35218 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.42■□□□□ 0.06
Cpsf2O35218 Gm10154-201ENSMUST00000084445 354 ntBASIC15.42■□□□□ 0.06
Cpsf2O35218 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf2O35218 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf2O35218 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf2O35218 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf2O35218 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf2O35218 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cpsf2O35218 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.42■□□□□ 0.06
Cpsf2O35218 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.41■□□□□ 0.06
Cpsf2O35218 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.41■□□□□ 0.06
Cpsf2O35218 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.41■□□□□ 0.06
Cpsf2O35218 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.41■□□□□ 0.06
Cpsf2O35218 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.41■□□□□ 0.06
Cpsf2O35218 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cpsf2O35218 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Cpsf2O35218 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cpsf2O35218 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Cpsf2O35218 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.4■□□□□ 0.06
Cpsf2O35218 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.4■□□□□ 0.06
Cpsf2O35218 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.4■□□□□ 0.06
Cpsf2O35218 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.4■□□□□ 0.06
Cpsf2O35218 Gm2272-201ENSMUST00000194903 582 ntBASIC15.4■□□□□ 0.06
Cpsf2O35218 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.4■□□□□ 0.06
Cpsf2O35218 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.4■□□□□ 0.06
Cpsf2O35218 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
Cpsf2O35218 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cpsf2O35218 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cpsf2O35218 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cpsf2O35218 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cpsf2O35218 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Cpsf2O35218 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Cpsf2O35218 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.39■□□□□ 0.05
Cpsf2O35218 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.39■□□□□ 0.05
Cpsf2O35218 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms