Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ebf3O08791 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.96□□□□□ -0.01
Ebf3O08791 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.96□□□□□ -0.01
Ebf3O08791 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ebf3O08791 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.96□□□□□ -0.01
Ebf3O08791 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.96□□□□□ -0.01
Ebf3O08791 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ebf3O08791 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ebf3O08791 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ebf3O08791 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ebf3O08791 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ebf3O08791 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.96□□□□□ -0.02
Ebf3O08791 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ebf3O08791 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ebf3O08791 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ebf3O08791 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ebf3O08791 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Ebf3O08791 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ebf3O08791 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.95□□□□□ -0.02
Ebf3O08791 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.95□□□□□ -0.02
Ebf3O08791 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.95□□□□□ -0.02
Ebf3O08791 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.95□□□□□ -0.02
Ebf3O08791 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.95□□□□□ -0.02
Ebf3O08791 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ebf3O08791 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Ebf3O08791 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.95□□□□□ -0.02
Ebf3O08791 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Ebf3O08791 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Ebf3O08791 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ebf3O08791 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.94□□□□□ -0.02
Ebf3O08791 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.94□□□□□ -0.02
Ebf3O08791 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.94□□□□□ -0.02
Ebf3O08791 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ebf3O08791 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ebf3O08791 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Ebf3O08791 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.94□□□□□ -0.02
Ebf3O08791 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ebf3O08791 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.94□□□□□ -0.02
Ebf3O08791 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Ebf3O08791 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.94□□□□□ -0.02
Ebf3O08791 Mir1897-201ENSMUST00000122581 272 ntBASIC14.94□□□□□ -0.02
Ebf3O08791 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ebf3O08791 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf3O08791 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ebf3O08791 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
Ebf3O08791 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms