Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.5□□□□□ -0.25
Colca2F8VPY8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Gm19184-201ENSMUST00000196798 928 ntBASIC13.5□□□□□ -0.25
Colca2F8VPY8 Gm3961-201ENSMUST00000204425 994 ntBASIC13.5□□□□□ -0.25
Colca2F8VPY8 Gm45880-201ENSMUST00000213041 853 ntBASIC13.5□□□□□ -0.25
Colca2F8VPY8 Gm8598-201ENSMUST00000221184 836 ntBASIC13.5□□□□□ -0.25
Colca2F8VPY8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.5□□□□□ -0.25
Colca2F8VPY8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.49□□□□□ -0.25
Colca2F8VPY8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Gm18827-201ENSMUST00000188341 790 ntBASIC13.49□□□□□ -0.25
Colca2F8VPY8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Colca2F8VPY8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.48□□□□□ -0.25
Colca2F8VPY8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Colca2F8VPY8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.48□□□□□ -0.25
Colca2F8VPY8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Gm27331-201ENSMUST00000183705 60 ntBASIC13.48□□□□□ -0.25
Colca2F8VPY8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.48□□□□□ -0.25
Colca2F8VPY8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Colca2F8VPY8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.48□□□□□ -0.25
Colca2F8VPY8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.48□□□□□ -0.25
Colca2F8VPY8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Colca2F8VPY8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms