Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh9F8VPK8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Gm9385-201ENSMUST00000117563 472 ntBASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Gm12260-201ENSMUST00000122447 411 ntBASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Gm6443-201ENSMUST00000203599 874 ntBASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 AW822252-206ENSMUST00000208904 237 ntBASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.76□□□□□ -0.05
Pcdh9F8VPK8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdh9F8VPK8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Gm8584-201ENSMUST00000171982 758 ntBASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Gm17968-201ENSMUST00000194902 784 ntBASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdh9F8VPK8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms