Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdr1E9Q0B4 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdr1E9Q0B4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdr1E9Q0B4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdr1E9Q0B4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdr1E9Q0B4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdr1E9Q0B4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdr1E9Q0B4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdr1E9Q0B4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdr1E9Q0B4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdr1E9Q0B4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cdr1E9Q0B4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Gm45328-201ENSMUST00000210942 917 ntBASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdr1E9Q0B4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Gm12497-201ENSMUST00000138778 237 ntBASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdr1E9Q0B4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdr1E9Q0B4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms