Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Gm44771-201ENSMUST00000206975 626 ntBASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Acot6-202ENSMUST00000222921 3622 ntBASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28043E0CXC2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Gm28043E0CXC2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm28043E0CXC2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm28043E0CXC2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28043E0CXC2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Carlr-201ENSMUST00000181515 2574 ntBASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms