Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tmf1B9EKI3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tmf1B9EKI3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmf1B9EKI3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Ssr1-204ENSMUST00000225319 1610 ntBASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Gm27437-201ENSMUST00000183429 107 ntBASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Gm9229-201ENSMUST00000222777 126 ntBASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Gm45667-201ENSMUST00000210380 1316 ntBASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tmf1B9EKI3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Mir8102-201ENSMUST00000184148 139 ntBASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Gm6916-202ENSMUST00000205523 195 ntBASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmf1B9EKI3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC19.42■□□□□ 0.7
Tmf1B9EKI3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Mir7684-201ENSMUST00000183858 60 ntBASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Gm45133-201ENSMUST00000207548 2773 ntBASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Gm37736-201ENSMUST00000193564 2802 ntBASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmf1B9EKI3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC19.41■□□□□ 0.7
Tmf1B9EKI3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmf1B9EKI3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmf1B9EKI3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tmf1B9EKI3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC19.41■□□□□ 0.7
Tmf1B9EKI3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmf1B9EKI3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms