Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Syce3B5KM66 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Syce3B5KM66 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Syce3B5KM66 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.48■□□□□ 0.23
Syce3B5KM66 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Syce3B5KM66 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.48■□□□□ 0.23
Syce3B5KM66 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.48■□□□□ 0.23
Syce3B5KM66 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Syce3B5KM66 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.48■□□□□ 0.23
Syce3B5KM66 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Syce3B5KM66 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Syce3B5KM66 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Syce3B5KM66 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Syce3B5KM66 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.47■□□□□ 0.23
Syce3B5KM66 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Syce3B5KM66 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Gm5682-201ENSMUST00000173402 505 ntBASIC16.47■□□□□ 0.23
Syce3B5KM66 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.47■□□□□ 0.23
Syce3B5KM66 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.47■□□□□ 0.23
Syce3B5KM66 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.47■□□□□ 0.23
Syce3B5KM66 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Syce3B5KM66 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Syce3B5KM66 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syce3B5KM66 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Syce3B5KM66 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Syce3B5KM66 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Syce3B5KM66 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.46■□□□□ 0.23
Syce3B5KM66 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.46■□□□□ 0.23
Syce3B5KM66 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.46■□□□□ 0.23
Syce3B5KM66 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.46■□□□□ 0.23
Syce3B5KM66 Gm27704-201ENSMUST00000185094 107 ntBASIC16.46■□□□□ 0.23
Syce3B5KM66 Gm37153-201ENSMUST00000193637 231 ntBASIC16.46■□□□□ 0.23
Syce3B5KM66 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Syce3B5KM66 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.46■□□□□ 0.23
Syce3B5KM66 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Syce3B5KM66 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.46■□□□□ 0.23
Syce3B5KM66 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syce3B5KM66 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms