Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col4a6B1AVK5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Gm38002-201ENSMUST00000193255 180 ntBASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col4a6B1AVK5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.52□□□□□ -0.09
Col4a6B1AVK5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Gm45930-201ENSMUST00000221330 292 ntBASIC14.52□□□□□ -0.09
Col4a6B1AVK5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col4a6B1AVK5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Gm5687-201ENSMUST00000118252 640 ntBASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Gm2445-201ENSMUST00000182798 989 ntBASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Gm5161-201ENSMUST00000075243 853 ntBASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col4a6B1AVK5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.5□□□□□ -0.09
Col4a6B1AVK5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms