Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chd6A3KFM7 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.54□□□□□ -0.56
Chd6A3KFM7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Gm6916-202ENSMUST00000205523 195 ntBASIC11.53□□□□□ -0.56
Chd6A3KFM7 Gm4607-201ENSMUST00000206649 577 ntBASIC11.53□□□□□ -0.56
Chd6A3KFM7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
Chd6A3KFM7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Gm10275-202ENSMUST00000168697 495 ntBASIC11.53□□□□□ -0.56
Chd6A3KFM7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Gm10275-201ENSMUST00000092620 635 ntBASIC11.53□□□□□ -0.56
Chd6A3KFM7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd6A3KFM7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.53□□□□□ -0.56
Chd6A3KFM7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Chd6A3KFM7 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.53□□□□□ -0.56
Chd6A3KFM7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd6A3KFM7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd6A3KFM7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Chd6A3KFM7 Gm16397-201ENSMUST00000122201 494 ntBASIC11.52□□□□□ -0.56
Chd6A3KFM7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.52□□□□□ -0.56
Chd6A3KFM7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.52□□□□□ -0.56
Chd6A3KFM7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.52□□□□□ -0.56
Chd6A3KFM7 Gm17889-201ENSMUST00000198410 598 ntBASIC11.52□□□□□ -0.56
Chd6A3KFM7 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.52□□□□□ -0.56
Chd6A3KFM7 Gm18905-201ENSMUST00000205454 928 ntBASIC11.52□□□□□ -0.56
Chd6A3KFM7 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.52□□□□□ -0.56
Chd6A3KFM7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Chd6A3KFM7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd6A3KFM7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd6A3KFM7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.52□□□□□ -0.56
Chd6A3KFM7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd6A3KFM7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd6A3KFM7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Gm18473-201ENSMUST00000220543 868 ntBASIC11.52□□□□□ -0.57
Chd6A3KFM7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.52□□□□□ -0.57
Chd6A3KFM7 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.52□□□□□ -0.57
Chd6A3KFM7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.52□□□□□ -0.57
Chd6A3KFM7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.52□□□□□ -0.57
Chd6A3KFM7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd6A3KFM7 Gm11340-201ENSMUST00000119226 412 ntBASIC11.51□□□□□ -0.57
Chd6A3KFM7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Gm44100-201ENSMUST00000204329 436 ntBASIC11.51□□□□□ -0.57
Chd6A3KFM7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.51□□□□□ -0.57
Chd6A3KFM7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.51□□□□□ -0.57
Chd6A3KFM7 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.51□□□□□ -0.57
Chd6A3KFM7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.51□□□□□ -0.57
Chd6A3KFM7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms