Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm2451-201ENSMUST00000199447 999 ntBASIC12.13□□□□□ -0.47
Col6a4A2AX52 Gm10290-201ENSMUST00000200451 999 ntBASIC12.13□□□□□ -0.47
Col6a4A2AX52 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Gm9257-201ENSMUST00000221254 232 ntBASIC12.13□□□□□ -0.47
Col6a4A2AX52 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.13□□□□□ -0.47
Col6a4A2AX52 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a4A2AX52 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Gm6244-201ENSMUST00000178732 841 ntBASIC12.12□□□□□ -0.47
Col6a4A2AX52 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Gm19220-201ENSMUST00000222682 803 ntBASIC12.12□□□□□ -0.47
Col6a4A2AX52 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Celf4-206ENSMUST00000224553 1729 ntBASIC12.12□□□□□ -0.47
Col6a4A2AX52 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Col6a4A2AX52 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Col6a4A2AX52 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Gm37230-201ENSMUST00000194491 818 ntBASIC12.12□□□□□ -0.47
Col6a4A2AX52 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.12□□□□□ -0.47
Col6a4A2AX52 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.12□□□□□ -0.47
Col6a4A2AX52 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col6a4A2AX52 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Gm45098-201ENSMUST00000207179 657 ntBASIC12.11□□□□□ -0.47
Col6a4A2AX52 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.11□□□□□ -0.47
Col6a4A2AX52 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Gm13392-201ENSMUST00000117708 150 ntBASIC12.11□□□□□ -0.47
Col6a4A2AX52 Gm14660-201ENSMUST00000119809 575 ntBASIC12.11□□□□□ -0.47
Col6a4A2AX52 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms