Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3854A0A1B0GSS6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gm3854A0A1B0GSS6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3854A0A1B0GSS6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3854A0A1B0GSS6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3854A0A1B0GSS6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3854A0A1B0GSS6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gm3854A0A1B0GSS6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm3854A0A1B0GSS6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3854A0A1B0GSS6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm3854A0A1B0GSS6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3854A0A1B0GSS6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3854A0A1B0GSS6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3854A0A1B0GSS6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gm3854A0A1B0GSS6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms