Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm45053-201ENSMUST00000206112 2499 ntBASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm43075-201ENSMUST00000198613 3905 ntBASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Gm3880A0A1B0GSB3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm20554-201ENSMUST00000177421 2352 ntBASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm17661-201ENSMUST00000170317 270 ntBASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm5921-201ENSMUST00000075898 882 ntBASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm42463-201ENSMUST00000198041 4886 ntBASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Gm42706-201ENSMUST00000199733 1910 ntBASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Gm3880A0A1B0GSB3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC7.02□□□□□ -1.28
Gm3880A0A1B0GSB3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Gm3880A0A1B0GSB3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Gm3880A0A1B0GSB3 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
Gm3880A0A1B0GSB3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC7.02□□□□□ -1.29
Gm3880A0A1B0GSB3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms