Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm23634-201ENSMUST00000175071 91 ntBASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Paupar-201ENSMUST00000194826 3482 ntBASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm15165-201ENSMUST00000118140 502 ntBASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm27742-201ENSMUST00000184667 60 ntBASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3n-3A0A0G2JEM0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm15372-201ENSMUST00000120729 834 ntBASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm18622-201ENSMUST00000219361 595 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms