Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm21559-201ENSMUST00000220638 855 ntBASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Gm8587-201ENSMUST00000076538 843 ntBASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav8-1A0A075B641 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Gm9484-201ENSMUST00000195892 1159 ntBASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav8-1A0A075B641 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Gm18101-201ENSMUST00000215769 548 ntBASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms