Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.08□□□□□ -0.64
PdfS4R2K0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
PdfS4R2K0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.08□□□□□ -0.64
PdfS4R2K0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
PdfS4R2K0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
PdfS4R2K0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.07□□□□□ -0.64
PdfS4R2K0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
PdfS4R2K0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
PdfS4R2K0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
PdfS4R2K0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.07□□□□□ -0.64
PdfS4R2K0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
PdfS4R2K0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.07□□□□□ -0.64
PdfS4R2K0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.07□□□□□ -0.64
PdfS4R2K0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Gm23547-201ENSMUST00000158210 271 ntBASIC11.07□□□□□ -0.64
PdfS4R2K0 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.07□□□□□ -0.64
PdfS4R2K0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Mzt1-203ENSMUST00000227948 952 ntBASIC11.07□□□□□ -0.64
PdfS4R2K0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
PdfS4R2K0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
PdfS4R2K0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
PdfS4R2K0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
PdfS4R2K0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
PdfS4R2K0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.06□□□□□ -0.64
PdfS4R2K0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
PdfS4R2K0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Gm12008-201ENSMUST00000117791 755 ntBASIC11.06□□□□□ -0.64
PdfS4R2K0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.06□□□□□ -0.64
PdfS4R2K0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.06□□□□□ -0.64
PdfS4R2K0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.06□□□□□ -0.64
PdfS4R2K0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
PdfS4R2K0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
PdfS4R2K0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms