Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Gm6089-201ENSMUST00000197666 938 ntBASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Olfr286-202ENSMUST00000205305 969 ntBASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Gm18246-201ENSMUST00000221023 728 ntBASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk1bQ9Z2C6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk1bQ9Z2C6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Gm2451-201ENSMUST00000199447 999 ntBASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Gm10290-201ENSMUST00000200451 999 ntBASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms