Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn9Q9Z0S7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Gm6443-201ENSMUST00000203599 874 ntBASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn9Q9Z0S7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Gm18737-201ENSMUST00000173594 937 ntBASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 AW822252-206ENSMUST00000208904 237 ntBASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldn9Q9Z0S7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Cldn9Q9Z0S7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.85□□□□□ -0.19
Cldn9Q9Z0S7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cldn9Q9Z0S7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms