Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cx3cr1Q9Z0D9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Gm13836-201ENSMUST00000121159 501 ntBASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cx3cr1Q9Z0D9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Gm7284-201ENSMUST00000131667 944 ntBASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cx3cr1Q9Z0D9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms