Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn5Q9WU28 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn5Q9WU28 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn5Q9WU28 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn5Q9WU28 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.86□□□□□ -0.51
Pfdn5Q9WU28 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn5Q9WU28 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn5Q9WU28 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pfdn5Q9WU28 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pfdn5Q9WU28 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Gm44454-201ENSMUST00000198541 138 ntBASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Pfdn5Q9WU28 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.84□□□□□ -0.51
Pfdn5Q9WU28 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.51
Pfdn5Q9WU28 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pfdn5Q9WU28 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Gm15565-201ENSMUST00000118890 427 ntBASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Gm25016-201ENSMUST00000158399 131 ntBASIC11.83□□□□□ -0.52
Pfdn5Q9WU28 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms