Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trem1Q9JKE2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trem1Q9JKE2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trem1Q9JKE2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trem1Q9JKE2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trem1Q9JKE2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trem1Q9JKE2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Gm37055-201ENSMUST00000191866 133 ntBASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trem1Q9JKE2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Gm7889-201ENSMUST00000185591 958 ntBASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.92□□□□□ -0.34
Trem1Q9JKE2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Gm22240-201ENSMUST00000175225 82 ntBASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Trem1Q9JKE2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trem1Q9JKE2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms