Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Gm10849-201ENSMUST00000100397 618 ntBASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smco4Q9JIS3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Gm11539-201ENSMUST00000119837 557 ntBASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Smco4Q9JIS3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Gm11336-201ENSMUST00000118168 334 ntBASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Gm12933-201ENSMUST00000120203 872 ntBASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.55□□□□□ -0.56
Smco4Q9JIS3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.55□□□□□ -0.56
Smco4Q9JIS3 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smco4Q9JIS3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms