Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
OtofQ9ESF1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Mir6392-201ENSMUST00000184924 108 ntBASIC14.2□□□□□ -0.14
OtofQ9ESF1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.2□□□□□ -0.14
OtofQ9ESF1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Gm17795-201ENSMUST00000214505 757 ntBASIC14.2□□□□□ -0.14
OtofQ9ESF1 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.2□□□□□ -0.14
OtofQ9ESF1 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.2□□□□□ -0.14
OtofQ9ESF1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
OtofQ9ESF1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.2□□□□□ -0.14
OtofQ9ESF1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.2□□□□□ -0.14
OtofQ9ESF1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OtofQ9ESF1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
OtofQ9ESF1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.19□□□□□ -0.14
OtofQ9ESF1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
OtofQ9ESF1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.19□□□□□ -0.14
OtofQ9ESF1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.19□□□□□ -0.14
OtofQ9ESF1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
OtofQ9ESF1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.18□□□□□ -0.14
OtofQ9ESF1 Gm37917-201ENSMUST00000194711 392 ntBASIC14.18□□□□□ -0.14
OtofQ9ESF1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.18□□□□□ -0.14
OtofQ9ESF1 Gm15823-201ENSMUST00000064305 670 ntBASIC14.18□□□□□ -0.14
OtofQ9ESF1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.18□□□□□ -0.14
OtofQ9ESF1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms