Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Gm5779-201ENSMUST00000218467 910 ntBASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdc40Q9DC48 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.39□□□□□ -0.27
Cdc40Q9DC48 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdc40Q9DC48 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.39□□□□□ -0.27
Cdc40Q9DC48 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Gm16026-204ENSMUST00000162652 683 ntBASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdc40Q9DC48 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cdc40Q9DC48 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms