Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Olfr286-202ENSMUST00000205305 969 ntBASIC15.06■□□□□ 0
Chmp2aQ9DB34 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp2aQ9DB34 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chmp2aQ9DB34 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Chmp2aQ9DB34 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.05■□□□□ 0
Chmp2aQ9DB34 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp2aQ9DB34 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.05■□□□□ 0
Chmp2aQ9DB34 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Gm18737-201ENSMUST00000173594 937 ntBASIC15.05■□□□□ -0
Chmp2aQ9DB34 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.05■□□□□ -0
Chmp2aQ9DB34 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.05■□□□□ -0
Chmp2aQ9DB34 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.05■□□□□ -0
Chmp2aQ9DB34 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.05■□□□□ -0
Chmp2aQ9DB34 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp2aQ9DB34 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.04■□□□□ -0
Chmp2aQ9DB34 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.04■□□□□ -0
Chmp2aQ9DB34 Gm5312-201ENSMUST00000203728 547 ntBASIC15.04■□□□□ -0
Chmp2aQ9DB34 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.04■□□□□ -0
Chmp2aQ9DB34 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.04■□□□□ -0
Chmp2aQ9DB34 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms