Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Gm8097-201ENSMUST00000117903 829 ntBASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Trim42Q9D2H5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Gm15372-201ENSMUST00000120729 834 ntBASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms