Protein–RNA interactions for Protein: Q9D287

Bcas2, Pre-mRNA-splicing factor SPF27, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bcas2Q9D287 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bcas2Q9D287 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.98□□□□□ -0.17
Bcas2Q9D287 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bcas2Q9D287 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.98□□□□□ -0.17
Bcas2Q9D287 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Bcas2Q9D287 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.97□□□□□ -0.17
Bcas2Q9D287 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.97□□□□□ -0.17
Bcas2Q9D287 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.97□□□□□ -0.17
Bcas2Q9D287 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Bcas2Q9D287 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.96□□□□□ -0.17
Bcas2Q9D287 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.96□□□□□ -0.17
Bcas2Q9D287 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.96□□□□□ -0.17
Bcas2Q9D287 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Bcas2Q9D287 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Bcas2Q9D287 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Bcas2Q9D287 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Bcas2Q9D287 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Bcas2Q9D287 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Bcas2Q9D287 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Bcas2Q9D287 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Bcas2Q9D287 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Bcas2Q9D287 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Bcas2Q9D287 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Bcas2Q9D287 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Bcas2Q9D287 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Bcas2Q9D287 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.95□□□□□ -0.18
Bcas2Q9D287 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Bcas2Q9D287 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Bcas2Q9D287 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Bcas2Q9D287 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Bcas2Q9D287 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.95□□□□□ -0.18
Bcas2Q9D287 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Bcas2Q9D287 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Bcas2Q9D287 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.95□□□□□ -0.18
Bcas2Q9D287 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Bcas2Q9D287 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Bcas2Q9D287 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms