Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1lQ9CXF7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1lQ9CXF7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1lQ9CXF7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1lQ9CXF7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1lQ9CXF7 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd1lQ9CXF7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Gm12895-201ENSMUST00000122214 226 ntBASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd1lQ9CXF7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Gm12644-201ENSMUST00000119935 606 ntBASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Gm5682-201ENSMUST00000173402 505 ntBASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd1lQ9CXF7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chd1lQ9CXF7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd1lQ9CXF7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd1lQ9CXF7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd1lQ9CXF7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd1lQ9CXF7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms