Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Khdc3Q9CWU5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Gm20553-201ENSMUST00000204205 844 ntBASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Khdc3Q9CWU5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Khdc3Q9CWU5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Khdc3Q9CWU5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Khdc3Q9CWU5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.83□□□□□ -0.19
Khdc3Q9CWU5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Khdc3Q9CWU5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Khdc3Q9CWU5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Khdc3Q9CWU5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Khdc3Q9CWU5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Khdc3Q9CWU5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Khdc3Q9CWU5 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Khdc3Q9CWU5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms