Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.98■□□□□ 0.31
Smc3Q9CW03 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smc3Q9CW03 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.97■□□□□ 0.31
Smc3Q9CW03 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc3Q9CW03 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.96■□□□□ 0.31
Smc3Q9CW03 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Thap2-203ENSMUST00000218989 527 ntBASIC16.96■□□□□ 0.31
Smc3Q9CW03 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smc3Q9CW03 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc3Q9CW03 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.96■□□□□ 0.3
Smc3Q9CW03 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Smc3Q9CW03 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Smc3Q9CW03 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.95■□□□□ 0.3
Smc3Q9CW03 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.95■□□□□ 0.3
Smc3Q9CW03 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Gm5177-201ENSMUST00000183092 997 ntBASIC16.95■□□□□ 0.3
Smc3Q9CW03 Gm2651-201ENSMUST00000203560 838 ntBASIC16.95■□□□□ 0.3
Smc3Q9CW03 Gm9182-201ENSMUST00000217829 639 ntBASIC16.95■□□□□ 0.3
Smc3Q9CW03 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smc3Q9CW03 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.94■□□□□ 0.3
Smc3Q9CW03 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Smc3Q9CW03 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Smc3Q9CW03 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc3Q9CW03 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc3Q9CW03 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.94■□□□□ 0.3
Smc3Q9CW03 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smc3Q9CW03 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smc3Q9CW03 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smc3Q9CW03 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Smc3Q9CW03 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.94■□□□□ 0.3
Smc3Q9CW03 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc3Q9CW03 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smc3Q9CW03 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Smc3Q9CW03 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms