Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn3Q9CVD2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn3Q9CVD2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn3Q9CVD2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn3Q9CVD2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn3Q9CVD2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atxn3Q9CVD2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn3Q9CVD2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Gm24543-201ENSMUST00000103867 82 ntBASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 AA543401-201ENSMUST00000164248 1269 ntBASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Gm16476-201ENSMUST00000221544 139 ntBASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn3Q9CVD2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atxn3Q9CVD2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC18.52■□□□□ 0.55
Atxn3Q9CVD2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atxn3Q9CVD2 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.52■□□□□ 0.55
Atxn3Q9CVD2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atxn3Q9CVD2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.52■□□□□ 0.55
Atxn3Q9CVD2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atxn3Q9CVD2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Mir1897-201ENSMUST00000122581 272 ntBASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Gm6888-201ENSMUST00000221983 706 ntBASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Atxn3Q9CVD2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Gm27430-201ENSMUST00000184585 107 ntBASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Gm44333-201ENSMUST00000197168 107 ntBASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn3Q9CVD2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms