Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Otud1Q9CUB6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Otud1Q9CUB6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Otud1Q9CUB6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Otud1Q9CUB6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.65□□□□□ -0.22
Otud1Q9CUB6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Otud1Q9CUB6 Gm45251-201ENSMUST00000209486 1465 ntBASIC13.65□□□□□ -0.22
Otud1Q9CUB6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Otud1Q9CUB6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Otud1Q9CUB6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Otud1Q9CUB6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Otud1Q9CUB6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Otud1Q9CUB6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Gm13453-201ENSMUST00000118708 357 ntBASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Mir1897-201ENSMUST00000122581 272 ntBASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Shd-206ENSMUST00000225145 998 ntBASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Otud1Q9CUB6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.63□□□□□ -0.23
Otud1Q9CUB6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Gm25144-201ENSMUST00000179561 110 ntBASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Gm25352-201ENSMUST00000179815 110 ntBASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Dupd1-202ENSMUST00000224735 548 ntBASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Otud1Q9CUB6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Gm14057-201ENSMUST00000120631 482 ntBASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Gm27989-201ENSMUST00000184721 107 ntBASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Gm28196-201ENSMUST00000187719 640 ntBASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Gm44344-201ENSMUST00000200287 129 ntBASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms