Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Gm10576-201ENSMUST00000191927 825 ntBASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Gm43125-201ENSMUST00000201724 730 ntBASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Gm18057-201ENSMUST00000208220 503 ntBASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sft2d3Q9CSV6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Gm44872-201ENSMUST00000207864 420 ntBASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sft2d3Q9CSV6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Gm43474-201ENSMUST00000196415 774 ntBASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sft2d3Q9CSV6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 1209.9 ms