Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Gm4204-201ENSMUST00000110798 1231 ntBASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Gm8185-201ENSMUST00000160999 669 ntBASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Gm27533-201ENSMUST00000183800 152 ntBASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 AC135669.1-201ENSMUST00000213585 412 ntBASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Gm3365-201ENSMUST00000216296 1480 ntBASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sec61bQ9CQS8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Sec61bQ9CQS8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
Sec61bQ9CQS8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
Sec61bQ9CQS8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
Sec61bQ9CQS8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
Sec61bQ9CQS8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 AC129336.1-201ENSMUST00000220224 2277 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Syt7-205ENSMUST00000224135 1557 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm7488-201ENSMUST00000117148 684 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm6222-201ENSMUST00000120787 396 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm8988-201ENSMUST00000155015 1240 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm3436-201ENSMUST00000179930 840 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm29541-201ENSMUST00000191351 678 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm19080-201ENSMUST00000196082 550 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm9063-201ENSMUST00000223299 582 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 CT025552.1-201ENSMUST00000224561 521 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Asic1-205ENSMUST00000228185 1818 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm5320-201ENSMUST00000207163 1519 ntBASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms