Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTRAFQ9CQE8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTRAFQ9CQE8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Gm8318-201ENSMUST00000182954 872 ntBASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RTRAFQ9CQE8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.71□□□□□ -0.53
RTRAFQ9CQE8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.71□□□□□ -0.54
RTRAFQ9CQE8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTRAFQ9CQE8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms