Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.64□□□□□ -0.23
Ska1Q9CPV1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Gm18195-201ENSMUST00000207604 706 ntBASIC13.64□□□□□ -0.23
Ska1Q9CPV1 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ska1Q9CPV1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ska1Q9CPV1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Gm5864-201ENSMUST00000202263 970 ntBASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ska1Q9CPV1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ska1Q9CPV1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ska1Q9CPV1 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.61□□□□□ -0.23
Ska1Q9CPV1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ska1Q9CPV1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ska1Q9CPV1 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ska1Q9CPV1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.61□□□□□ -0.23
Ska1Q9CPV1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ska1Q9CPV1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms