Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Krt88Q9CPR6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Krt88Q9CPR6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Krt88Q9CPR6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt88Q9CPR6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt88Q9CPR6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt88Q9CPR6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt88Q9CPR6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Krt88Q9CPR6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt88Q9CPR6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt88Q9CPR6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Krt88Q9CPR6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt88Q9CPR6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt88Q9CPR6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt88Q9CPR6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.02□□□□□ -0.33
Krt88Q9CPR6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gm8749-201ENSMUST00000117737 331 ntBASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gm14042-201ENSMUST00000120139 833 ntBASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gm12895-201ENSMUST00000122214 226 ntBASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gm11780-201ENSMUST00000136880 516 ntBASIC13.01□□□□□ -0.33
Krt88Q9CPR6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gm17807-201ENSMUST00000186869 298 ntBASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gm9682-201ENSMUST00000197505 556 ntBASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Krt88Q9CPR6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Krt88Q9CPR6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt88Q9CPR6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms