Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn4Q99P72 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtn4Q99P72 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn4Q99P72 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn4Q99P72 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC18.58■□□□□ 0.57
Rtn4Q99P72 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn4Q99P72 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn4Q99P72 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn4Q99P72 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn4Q99P72 AC140393.3-201ENSMUST00000228396 1352 ntBASIC18.58■□□□□ 0.57
Rtn4Q99P72 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn4Q99P72 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Rtn4Q99P72 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn4Q99P72 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn4Q99P72 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtn4Q99P72 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Gm2272-201ENSMUST00000194903 582 ntBASIC18.58■□□□□ 0.56
Rtn4Q99P72 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn4Q99P72 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtn4Q99P72 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Ntrk2-208ENSMUST00000225583 2719 ntBASIC18.57■□□□□ 0.56
Rtn4Q99P72 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Mir449b-201ENSMUST00000104833 80 ntBASIC18.57■□□□□ 0.56
Rtn4Q99P72 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Gm43066-201ENSMUST00000199589 1260 ntBASIC18.57■□□□□ 0.56
Rtn4Q99P72 AC154838.2-201ENSMUST00000226602 747 ntBASIC18.57■□□□□ 0.56
Rtn4Q99P72 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtn4Q99P72 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Gm22175-201ENSMUST00000175007 78 ntBASIC18.56■□□□□ 0.56
Rtn4Q99P72 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.56■□□□□ 0.56
Rtn4Q99P72 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.56■□□□□ 0.56
Rtn4Q99P72 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4Q99P72 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4Q99P72 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rtn4Q99P72 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4Q99P72 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4Q99P72 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4Q99P72 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4Q99P72 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.55■□□□□ 0.56
Rtn4Q99P72 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4Q99P72 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rtn4Q99P72 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.55■□□□□ 0.56
Rtn4Q99P72 Gm24158-201ENSMUST00000175263 71 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms