Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trem2Q99NH8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trem2Q99NH8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.67□□□□□ -0.06
Trem2Q99NH8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trem2Q99NH8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trem2Q99NH8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trem2Q99NH8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trem2Q99NH8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trem2Q99NH8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trem2Q99NH8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trem2Q99NH8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trem2Q99NH8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trem2Q99NH8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.66□□□□□ -0.06
Trem2Q99NH8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Rprl2-201ENSMUST00000157150 290 ntBASIC14.66□□□□□ -0.06
Trem2Q99NH8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Gm38225-201ENSMUST00000194001 393 ntBASIC14.66□□□□□ -0.06
Trem2Q99NH8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.66□□□□□ -0.06
Trem2Q99NH8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.66□□□□□ -0.06
Trem2Q99NH8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trem2Q99NH8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trem2Q99NH8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm11745-201ENSMUST00000121669 448 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm27494-201ENSMUST00000184735 189 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm29310-201ENSMUST00000185468 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21825-201ENSMUST00000185728 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm29109-201ENSMUST00000185895 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21896-201ENSMUST00000186520 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21873-201ENSMUST00000186728 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21794-201ENSMUST00000187056 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21880-201ENSMUST00000187275 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21826-201ENSMUST00000187451 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm8000-201ENSMUST00000188378 592 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21198-201ENSMUST00000188393 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21749-201ENSMUST00000189343 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21901-201ENSMUST00000189568 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm29424-201ENSMUST00000189716 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm28599-201ENSMUST00000189838 694 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21867-201ENSMUST00000189917 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm29269-201ENSMUST00000190087 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21722-201ENSMUST00000190153 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm28423-201ENSMUST00000190701 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21899-201ENSMUST00000190745 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21910-201ENSMUST00000191163 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21849-201ENSMUST00000191571 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm28678-201ENSMUST00000191593 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm20910-201ENSMUST00000193268 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Gm21871-201ENSMUST00000194621 696 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.65□□□□□ -0.06
Trem2Q99NH8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trem2Q99NH8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms